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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs2705638 chr21:30273686 G/T 1.19E-5 509 37.73 31.7 11.47 KM Plot
KIRC rs2764859 chr1:117662577 T/C 2.64E-7 507 37.03 38.93 3.37 KM Plot
KIRC rs28360595 chr6:26030044 A/G 6.46E-9 507 37.7 33.82 3.37 KM Plot
KIRC rs2839148 chr21:47632276 G/A 6.33E-6 495 37.57 37.47 9.4 KM Plot
KIRC rs2839282 chr21:47902822 C/G 1.81E-10 509 4.65 37.1 37.47 KM Plot
KIRC rs2839294 chr21:47917664 T/C 2.71E-5 505 37.2 43.25 6.87 KM Plot
KIRC rs2839620 chr21:44436789 A/G 1.11E-16 509 2.83 40.1 37.18 KM Plot
KIRC rs28410544 chr4:68297697 A/G 4.63E-5 507 18.4 43.42 37.18 KM Plot
KIRC rs28433213 chr19:46341168 C/T 7.81E-8 508 38.1 28.03 1.77 KM Plot
KIRC rs28459318 chr15:24425415 G/A 2.68E-8 498 37.67 30.9 3.3 KM Plot
KIRC rs2849218 chr11:125425951 T/C 6.67E-6 508 1.4 37.6 37.4 KM Plot
KIRC rs2849225 chr11:125415936 A/G 6.67E-6 505 1.43 37.6 36.95 KM Plot
KIRC rs28499501 chr4:107839706 G/A 1.81E-7 508 37.73 29.5 7.1 KM Plot
KIRC rs28509294 chr11:1536529 A/C 8.08E-5 509 37.47 37.37 5.47 KM Plot
KIRC rs28522398 chr4:107856694 T/G 3.81E-7 505 37.77 29.18 9.02 KM Plot